IL_8UU5_078
3D structure
- PDB id
- 8UU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCCG
- Length
- 16 nucleotides
- Bulged bases
- 8UU5|1|A|A|1971, 8UU5|1|A|U|1977
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU5_078 not in the Motif Atlas
- Geometric match to IL_7A0S_072
- Geometric discrepancy: 0.1634
- The information below is about IL_7A0S_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
8UU5|1|A|C|1967
8UU5|1|A|G|1968
8UU5|1|A|A|1969
8UU5|1|A|A|1970
8UU5|1|A|A|1971
8UU5|1|A|U|1972
8UU5|1|A|U|1973
8UU5|1|A|C|1974
8UU5|1|A|C|1975
8UU5|1|A|U|1976
8UU5|1|A|U|1977
8UU5|1|A|G|1978
*
8UU5|1|A|C|1994
8UU5|1|A|C|1995
8UU5|1|A|C|1996
8UU5|1|A|G|1997
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain C
- Large ribosomal subunit protein uL2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: