IL_8UU5_139
3D structure
- PDB id
- 8UU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UG*CCAGA
- Length
- 7 nucleotides
- Bulged bases
- 8UU5|1|a|A|503
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU5_139 not in the Motif Atlas
- Geometric match to IL_4KQY_004
- Geometric discrepancy: 0.3048
- The information below is about IL_4KQY_004
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- Minor groove platform
- Motif group
- IL_94991.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 15
Unit IDs
8UU5|1|a|U|448
8UU5|1|a|G|449
*
8UU5|1|a|C|501
8UU5|1|a|C|502
8UU5|1|a|A|503
8UU5|1|a|G|504
8UU5|1|a|A|505
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain d
- Small ribosomal subunit protein uS4
Coloring options: