IL_8UU6_023
3D structure
- PDB id
- 8UU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GCG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 8UU6|1|A|C|822, 8UU6|1|A|A|834, 8UU6|1|A|A|835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU6_023 not in the Motif Atlas
- Geometric match to IL_7RQB_023
- Geometric discrepancy: 0.0871
- The information below is about IL_7RQB_023
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.6
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
8UU6|1|A|G|821
8UU6|1|A|C|822
8UU6|1|A|G|823
*
8UU6|1|A|C|833
8UU6|1|A|A|834
8UU6|1|A|A|835
8UU6|1|A|U|836
8UU6|1|A|C|837
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 6
- Large ribosomal subunit protein bL34
- Chain C
- Large ribosomal subunit protein uL2
- Chain E
- Large ribosomal subunit protein uL4
- Chain U
- Large ribosomal subunit protein uL22
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