IL_8UU6_124
3D structure
- PDB id
- 8UU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CCUAAU*AGG
- Length
- 9 nucleotides
- Bulged bases
- 8UU6|1|a|C|48, 8UU6|1|a|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU6_124 not in the Motif Atlas
- Homologous match to IL_5J7L_003
- Geometric discrepancy: 0.1143
- The information below is about IL_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14177.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8UU6|1|a|C|47
8UU6|1|a|C|48
8UU6|1|a|U|49
8UU6|1|a|A|50
8UU6|1|a|A|51
8UU6|1|a|U|52
*
8UU6|1|a|A|367
8UU6|1|a|G|368
8UU6|1|a|G|369
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain l
- Small ribosomal subunit protein uS12
Coloring options: