IL_8UU6_138

3D structure

PDB id

8UU6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAACAAG*CCUUGAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UU6|1|a|G|458
8UU6|1|a|A|459
8UU6|1|a|A|460
8UU6|1|a|C|461
8UU6|1|a|A|462
8UU6|1|a|A|463
8UU6|1|a|G|464
*
8UU6|1|a|C|485
8UU6|1|a|C|486
8UU6|1|a|U|487
8UU6|1|a|U|488
8UU6|1|a|G|489
8UU6|1|a|A|490
8UU6|1|a|C|491

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain p

Small ribosomal subunit protein bS16