IL_8UU7_055
3D structure
- PDB id
- 8UU7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUAAG*CGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU7_055 not in the Motif Atlas
- Homologous match to IL_7A0S_048
- Geometric discrepancy: 0.0922
- The information below is about IL_7A0S_048
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- UAA/GAN
- Motif group
- IL_89021.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
8UU7|1|A|C|1395
8UU7|1|A|U|1396
8UU7|1|A|A|1397
8UU7|1|A|A|1398
8UU7|1|A|G|1399
*
8UU7|1|A|C|1420
8UU7|1|A|G|1421
8UU7|1|A|A|1422
8UU7|1|A|U|1423
8UU7|1|A|G|1424
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 6
- Large ribosomal subunit protein bL34
- Chain C
- Large ribosomal subunit protein uL2
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