IL_8UU9_168

3D structure

PDB id

8UU9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUACAAAG*CAUAAAAC

Length

16 nucleotides

Bulged bases

8UU9|1|a|U|1293

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UU9|1|a|G|1253
8UU9|1|a|U|1254
8UU9|1|a|A|1255
8UU9|1|a|C|1256
8UU9|1|a|A|1257
8UU9|1|a|A|1258
8UU9|1|a|A|1259
8UU9|1|a|G|1260
*
8UU9|1|a|C|1291
8UU9|1|a|A|1292
8UU9|1|a|U|1293
8UU9|1|a|A|1294
8UU9|1|a|A|1295
8UU9|1|a|A|1296
8UU9|1|a|A|1297
8UU9|1|a|C|1298

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain g

Small ribosomal subunit protein uS7

Chain i

Small ribosomal subunit protein uS9

Chain j

Small ribosomal subunit protein uS10

Chain n

Small ribosomal subunit protein uS14