IL_8UVR_356

3D structure

PDB id

8UVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CUGUGAACCC*GGGGGAG

Length

17 nucleotides

Bulged bases

8UVR|1|1A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UVR|1|1A|C|2129
8UVR|1|1A|U|2130
8UVR|1|1A|G|2131
8UVR|1|1A|U|2132
8UVR|1|1A|G|2133
8UVR|1|1A|A|2134
8UVR|1|1A|A|2135
8UVR|1|1A|C|2136
8UVR|1|1A|C|2137
8UVR|1|1A|C|2138
*
8UVR|1|1A|G|2153
8UVR|1|1A|G|2154
8UVR|1|1A|G|2155
8UVR|1|1A|G|2156
8UVR|1|1A|G|2157
8UVR|1|1A|A|2158
8UVR|1|1A|G|2159

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains