IL_8UVS_102
3D structure
- PDB id
- 8UVS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.75 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UVS_102 not in the Motif Atlas
- Homologous match to IL_8VTW_102
- Geometric discrepancy: 0.0495
- The information below is about IL_8VTW_102
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.3
- Basepair signature
- cWW-cHS-tWH-cWW-R-L-cWW-tHS-L-R
- Number of instances in this motif group
- 5
Unit IDs
8UVS|1|1A|C|2652
8UVS|1|1A|U|2653
8UVS|1|1A|A|2654
8UVS|1|1A|G|2655
8UVS|1|1A|U|2656
8UVS|1|1A|A|2657
8UVS|1|1A|C|2658
*
8UVS|1|1A|G|2663
8UVS|1|1A|G|2664
8UVS|1|1A|A|2665
8UVS|1|1A|C|2666
8UVS|1|1A|C|2667
8UVS|1|1A|G|2668
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1H
- 50S ribosomal protein L6
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