3D structure

PDB id
8UX8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GUGUAGGAUAGG*CCC
Length
15 nucleotides
Bulged bases
8UX8|1|1|U|2111, 8UX8|1|1|G|2112, 8UX8|1|1|G|2115, 8UX8|1|1|U|2118
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UX8|1|1|G|2110
8UX8|1|1|U|2111
8UX8|1|1|G|2112
8UX8|1|1|U|2113
8UX8|1|1|A|2114
8UX8|1|1|G|2115
8UX8|1|1|G|2116
8UX8|1|1|A|2117
8UX8|1|1|U|2118
8UX8|1|1|A|2119
8UX8|1|1|G|2120
8UX8|1|1|G|2121
*
8UX8|1|1|C|2177
8UX8|1|1|C|2178
8UX8|1|1|C|2179

Current chains

Chain 1
23S rRNA

Nearby chains

Chain A
Large ribosomal subunit protein uL1

Coloring options:

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