IL_8UX8_086

3D structure

PDB id

8UX8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGAG*CGACCUUGAAAUACC

Length

20 nucleotides

Bulged bases

8UX8|1|1|C|2164, 8UX8|1|1|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UX8|1|1|G|2123
8UX8|1|1|G|2124
8UX8|1|1|G|2125
8UX8|1|1|A|2126
8UX8|1|1|G|2127
*
8UX8|1|1|C|2161
8UX8|1|1|G|2162
8UX8|1|1|A|2163
8UX8|1|1|C|2164
8UX8|1|1|C|2165
8UX8|1|1|U|2166
8UX8|1|1|U|2167
8UX8|1|1|G|2168
8UX8|1|1|A|2169
8UX8|1|1|A|2170
8UX8|1|1|A|2171
8UX8|1|1|U|2172
8UX8|1|1|A|2173
8UX8|1|1|C|2174
8UX8|1|1|C|2175

Current chains

Chain 1

23S rRNA

Nearby chains

Chain A

Large ribosomal subunit protein uL1