IL_8UX8_096

3D structure

PDB id

8UX8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUCA*UACGCGAG

Length

12 nucleotides

Bulged bases

8UX8|1|1|A|2572, 8UX8|1|1|C|2573, 8UX8|1|1|G|2576, 8UX8|1|1|A|2577

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UX8|1|1|C|2510
8UX8|1|1|U|2511
8UX8|1|1|C|2512
8UX8|1|1|A|2513
*
8UX8|1|1|U|2571
8UX8|1|1|A|2572
8UX8|1|1|C|2573
8UX8|1|1|G|2574
8UX8|1|1|C|2575
8UX8|1|1|G|2576
8UX8|1|1|A|2577
8UX8|1|1|G|2578

Current chains

Chain 1

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L3

Chain J

Large ribosomal subunit protein uL13

Chain b

50S ribosomal protein L32