IL_8UX8_154

3D structure

PDB id

8UX8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

8UX8|1|2|U|1029, 8UX8|1|2|U|1030, 8UX8|1|2|C|1031

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UX8|1|2|G|1003
8UX8|1|2|A|1004
8UX8|1|2|A|1005
8UX8|1|2|G|1006
*
8UX8|1|2|U|1023
8UX8|1|2|G|1024
8UX8|1|2|U|1025
8UX8|1|2|G|1026
8UX8|1|2|C|1027
8UX8|1|2|C|1028
8UX8|1|2|U|1029
8UX8|1|2|U|1030
8UX8|1|2|C|1031
8UX8|1|2|G|1032
8UX8|1|2|G|1033
8UX8|1|2|G|1034
8UX8|1|2|A|1035
8UX8|1|2|A|1036
8UX8|1|2|C|1037

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain s

Small ribosomal subunit protein uS14