IL_8UX8_181
3D structure
- PDB id
- 8UX8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UX8_181 not in the Motif Atlas
- Geometric match to IL_8CRE_391
- Geometric discrepancy: 0.1277
- The information below is about IL_8CRE_391
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 174
Unit IDs
8UX8|1|5|G|29
8UX8|1|5|U|30
8UX8|1|5|C|31
*
8UX8|1|5|G|39
8UX8|1|5|U|40
8UX8|1|5|C|41
Current chains
- Chain 5
- Lys-tRNA^proL
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain n
- Small ribosomal subunit protein uS9
- Chain r
- 30S ribosomal protein S13
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