IL_8UXA_001

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAG*CUA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXA_001 not in the Motif Atlas

Geometric match to IL_5E81_401

Geometric discrepancy: 0.3194

The information below is about IL_5E81_401

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42997.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

23

Unit IDs

8UXA|1|A|U|9
8UXA|1|A|A|10
8UXA|1|A|G|11
*
8UXA|1|A|C|3288
8UXA|1|A|U|3289
8UXA|1|A|A|3290

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain 5

Large ribosomal subunit protein mL44

Chain 9

Large ribosomal subunit protein mL57