IL_8UXA_014
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAAG*CAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 8UXA|1|A|G|692, 8UXA|1|A|G|696
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_014 not in the Motif Atlas
- Geometric match to IL_9DFE_016
- Geometric discrepancy: 0.1232
- The information below is about IL_9DFE_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
8UXA|1|A|G|583
8UXA|1|A|A|584
8UXA|1|A|A|585
8UXA|1|A|A|586
8UXA|1|A|G|587
*
8UXA|1|A|C|690
8UXA|1|A|A|691
8UXA|1|A|G|692
8UXA|1|A|A|693
8UXA|1|A|U|694
8UXA|1|A|A|695
8UXA|1|A|G|696
8UXA|1|A|C|697
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain D
- Large ribosomal subunit protein uL4m
- Chain J
- Large ribosomal subunit protein uL15m
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