IL_8UXA_038
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUAAU*AGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_038 not in the Motif Atlas
- Geometric match to IL_8B0X_111
- Geometric discrepancy: 0.1348
- The information below is about IL_8B0X_111
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89021.4
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
8UXA|1|A|C|1364
8UXA|1|A|U|1365
8UXA|1|A|A|1366
8UXA|1|A|A|1367
8UXA|1|A|U|1368
*
8UXA|1|A|A|1397
8UXA|1|A|G|1398
8UXA|1|A|A|1399
8UXA|1|A|U|1400
8UXA|1|A|G|1401
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein mL41
- Chain B
- Large ribosomal subunit protein uL2m
- Chain Y
- Large ribosomal subunit protein bL34m
Coloring options: