IL_8UXA_047
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAACUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_047 not in the Motif Atlas
- Geometric match to IL_8B0X_180
- Geometric discrepancy: 0.0838
- The information below is about IL_8B0X_180
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.1
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 10
Unit IDs
8UXA|1|A|G|1618
8UXA|1|A|G|1619
8UXA|1|A|A|1620
8UXA|1|A|A|1621
8UXA|1|A|C|1622
8UXA|1|A|U|1623
8UXA|1|A|C|1624
8UXA|1|A|G|1625
8UXA|1|A|G|1626
*
8UXA|1|A|C|1890
8UXA|1|A|U|1891
8UXA|1|A|G|1892
8UXA|1|A|U|1893
8UXA|1|A|C|1894
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain C
- Large ribosomal subunit protein uL3m
- Chain I
- Large ribosomal subunit protein uL14m
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