IL_8UXA_051

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AC*GAU

Length

5 nucleotides

Bulged bases

8UXA|1|A|A|1881

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXA_051 not in the Motif Atlas

Geometric match to IL_9DFE_069

Geometric discrepancy: 0.1324

The information below is about IL_9DFE_069

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

8UXA|1|A|A|1677
8UXA|1|A|C|1678
*
8UXA|1|A|G|1880
8UXA|1|A|A|1881
8UXA|1|A|U|1882

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain B

Large ribosomal subunit protein uL2m