IL_8UXA_079

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UC*GAAG

Length

6 nucleotides

Bulged bases

8UXA|1|A|A|2809

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXA_079 not in the Motif Atlas

Geometric match to IL_9DFE_099

Geometric discrepancy: 0.1134

The information below is about IL_9DFE_099

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_94991.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

17

Unit IDs

8UXA|1|A|U|2788
8UXA|1|A|C|2789
*
8UXA|1|A|G|2807
8UXA|1|A|A|2808
8UXA|1|A|A|2809
8UXA|1|A|G|2810

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain 0

Large ribosomal subunit protein bL36m

Chain H

Large ribosomal subunit protein uL13m