IL_8UXA_081
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAAAU*AUAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_081 not in the Motif Atlas
- Geometric match to IL_9DFE_075
- Geometric discrepancy: 0.1899
- The information below is about IL_9DFE_075
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 24
Unit IDs
8UXA|1|A|C|2902
8UXA|1|A|A|2903
8UXA|1|A|A|2904
8UXA|1|A|A|2905
8UXA|1|A|U|2906
*
8UXA|1|A|A|3112
8UXA|1|A|U|3113
8UXA|1|A|A|3114
8UXA|1|A|A|3115
8UXA|1|A|G|3116
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain C
- Large ribosomal subunit protein uL3m
- Chain H
- Large ribosomal subunit protein uL13m
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