IL_8UXA_086
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AAUAAA*UGAAGU
- Length
- 12 nucleotides
- Bulged bases
- 8UXA|1|A|A|3102
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_086 not in the Motif Atlas
- Geometric match to IL_9DFE_106
- Geometric discrepancy: 0.158
- The information below is about IL_9DFE_106
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_91079.1
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
8UXA|1|A|A|3073
8UXA|1|A|A|3074
8UXA|1|A|U|3075
8UXA|1|A|A|3076
8UXA|1|A|A|3077
8UXA|1|A|A|3078
*
8UXA|1|A|U|3099
8UXA|1|A|G|3100
8UXA|1|A|A|3101
8UXA|1|A|A|3102
8UXA|1|A|G|3103
8UXA|1|A|U|3104
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain 0
- Large ribosomal subunit protein bL36m
- Chain C
- Large ribosomal subunit protein uL3m
- Chain F
- Large ribosomal subunit protein uL6m
- Chain H
- Large ribosomal subunit protein uL13m
Coloring options: