IL_8UXA_112

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGACUAAUAU*AGA

Length

13 nucleotides

Bulged bases

8UXA|1|AL|U|624, 8UXA|1|AL|A|625

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UXA|1|AL|U|617
8UXA|1|AL|G|618
8UXA|1|AL|A|619
8UXA|1|AL|C|620
8UXA|1|AL|U|621
8UXA|1|AL|A|622
8UXA|1|AL|A|623
8UXA|1|AL|U|624
8UXA|1|AL|A|625
8UXA|1|AL|U|626
*
8UXA|1|AL|A|653
8UXA|1|AL|G|654
8UXA|1|AL|A|655

Current chains

Chain AL

Small ribosomal subunit rRNA

Nearby chains

Chain AF

Small ribosomal subunit protein mS45

Chain i

Ribosomal protein VAR1, mitochondrial

Chain j

37S ribosomal protein NAM9, mitochondrial

Chain r

Small ribosomal subunit protein uS12m