IL_8UXA_120
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAGUAA*UAAUAAUAA
- Length
- 15 nucleotides
- Bulged bases
- 8UXA|1|AL|U|768
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_120 not in the Motif Atlas
- Homologous match to IL_6CZR_143
- Geometric discrepancy: 0.2802
- The information below is about IL_6CZR_143
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37722.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8UXA|1|AL|U|748
8UXA|1|AL|A|749
8UXA|1|AL|G|750
8UXA|1|AL|U|751
8UXA|1|AL|A|752
8UXA|1|AL|A|753
*
8UXA|1|AL|U|765
8UXA|1|AL|A|766
8UXA|1|AL|A|767
8UXA|1|AL|U|768
8UXA|1|AL|A|769
8UXA|1|AL|A|770
8UXA|1|AL|U|771
8UXA|1|AL|A|772
8UXA|1|AL|A|773
Current chains
- Chain AL
- Small ribosomal subunit rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain q
- Small ribosomal subunit protein uS11m
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