3D structure

PDB id
8UXA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GAUAAUAAAA*UAUAAAAC
Length
18 nucleotides
Bulged bases
8UXA|1|AL|U|1280
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UXA|1|AL|G|1278
8UXA|1|AL|A|1279
8UXA|1|AL|U|1280
8UXA|1|AL|A|1281
8UXA|1|AL|A|1282
8UXA|1|AL|U|1283
8UXA|1|AL|A|1284
8UXA|1|AL|A|1285
8UXA|1|AL|A|1286
8UXA|1|AL|A|1287
*
8UXA|1|AL|U|1324
8UXA|1|AL|A|1325
8UXA|1|AL|U|1326
8UXA|1|AL|A|1327
8UXA|1|AL|A|1328
8UXA|1|AL|A|1329
8UXA|1|AL|A|1330
8UXA|1|AL|C|1331

Current chains

Chain AL
Small ribosomal subunit rRNA

Nearby chains

Chain AI
Small ribosomal subunit protein mS29
Chain AK
Small ribosomal subunit protein mS35
Chain m
Small ribosomal subunit protein uS7m
Chain o
Small ribosomal subunit protein uS9m
Chain p
Small ribosomal subunit protein uS10m
Chain t
37S ribosomal protein MRP2, mitochondrial

Coloring options:

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