IL_8UZG_030

3D structure

PDB id

8UZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UZG_030 not in the Motif Atlas

Geometric match to IL_5C5W_002

Geometric discrepancy: 0.2172

The information below is about IL_5C5W_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

8UZG|1|1|U|870
8UZG|1|1|U|871
8UZG|1|1|U|872
*
8UZG|1|1|A|905
8UZG|1|1|U|906
8UZG|1|1|G|907

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L16