3D structure

PDB id
8UZG (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GUGGGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUACCAC
Length
41 nucleotides
Bulged bases
8UZG|1|1|U|2132, 8UZG|1|1|U|2172
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UZG|1|1|G|2121
8UZG|1|1|U|2122
8UZG|1|1|G|2123
8UZG|1|1|G|2124
8UZG|1|1|G|2125
8UZG|1|1|A|2126
8UZG|1|1|G|2127
8UZG|1|1|G|2128
8UZG|1|1|C|2129
8UZG|1|1|U|2130
8UZG|1|1|U|2131
8UZG|1|1|U|2132
8UZG|1|1|G|2133
8UZG|1|1|A|2134
8UZG|1|1|A|2135
8UZG|1|1|G|2136
8UZG|1|1|U|2137
*
8UZG|1|1|A|2154
8UZG|1|1|U|2155
8UZG|1|1|G|2156
8UZG|1|1|G|2157
8UZG|1|1|A|2158
8UZG|1|1|G|2159
8UZG|1|1|C|2160
8UZG|1|1|C|2161
8UZG|1|1|G|2162
8UZG|1|1|A|2163
8UZG|1|1|C|2164
8UZG|1|1|C|2165
8UZG|1|1|U|2166
8UZG|1|1|U|2167
8UZG|1|1|G|2168
8UZG|1|1|A|2169
8UZG|1|1|A|2170
8UZG|1|1|A|2171
8UZG|1|1|U|2172
8UZG|1|1|A|2173
8UZG|1|1|C|2174
8UZG|1|1|C|2175
8UZG|1|1|A|2176
8UZG|1|1|C|2177

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 5
Transfer RNA; tRNA
Chain A
50S ribosomal protein L1

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1461 s