IL_8UZG_127

3D structure

PDB id

8UZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UZG_127 not in the Motif Atlas

Geometric match to IL_5J7L_020

Geometric discrepancy: 0.2484

The information below is about IL_5J7L_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

8UZG|1|2|U|409
8UZG|1|2|G|410
8UZG|1|2|A|411
8UZG|1|2|A|412
8UZG|1|2|G|413
8UZG|1|2|A|414
8UZG|1|2|A|415
8UZG|1|2|G|416
*
8UZG|1|2|U|427
8UZG|1|2|G|428
8UZG|1|2|U|429
8UZG|1|2|A|430
8UZG|1|2|A|431
8UZG|1|2|A|432
8UZG|1|2|G|433

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S4