IL_8V03_088
3D structure
- PDB id
- 8V03 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8V03_088 not in the Motif Atlas
- Geometric match to IL_9DFE_089
- Geometric discrepancy: 0.1227
- The information below is about IL_9DFE_089
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.15
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
8V03|1|1|C|2350
8V03|1|1|G|2351
8V03|1|1|A|2352
8V03|1|1|G|2353
*
8V03|1|1|C|2364
8V03|1|1|G|2365
8V03|1|1|A|2366
8V03|1|1|G|2367
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain O
- Large ribosomal subunit protein uL18
- Chain W
- Large ribosomal subunit protein bL27
- Chain e
- 50S ribosomal protein L35
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