IL_8V84_072
3D structure
- PDB id
- 8V84 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUGGUUUUUG*CGAAGCUA
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8V84|1|1|U|3050
8V84|1|1|U|3051
8V84|1|1|G|3052
8V84|1|1|G|3053
8V84|1|1|U|3054
8V84|1|1|U|3055
8V84|1|1|U|3056
8V84|1|1|U|3057
8V84|1|1|U|3058
8V84|1|1|G|3059
*
8V84|1|1|C|3084
8V84|1|1|G|3085
8V84|1|1|A|3086
8V84|1|1|A|3087
8V84|1|1|G|3088
8V84|1|1|C|3089
8V84|1|1|U|3090
8V84|1|1|A|3091
Current chains
- Chain 1
- Saccharomyces cerevisiae 25S ribosomal RNA
Nearby chains
- Chain B
- Large ribosomal subunit protein uL3
- Chain V
- 60S ribosomal protein L23-A
- Chain Z
- Ribosome biogenesis protein SSF1
- Chain u
- Ribosome biogenesis protein RLP24
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