IL_8V84_099
3D structure
- PDB id
- 8V84 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AGUAGAGUAGCC*GUUGUUACGAUCU
- Length
- 25 nucleotides
- Bulged bases
- 8V84|1|1|U|3341, 8V84|1|1|A|3344, 8V84|1|1|U|3346, 8V84|1|1|U|3354, 8V84|1|1|U|3355, 8V84|1|1|A|3362
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8V84|1|1|A|3339
8V84|1|1|G|3340
8V84|1|1|U|3341
8V84|1|1|A|3342
8V84|1|1|G|3343
8V84|1|1|A|3344
8V84|1|1|G|3345
8V84|1|1|U|3346
8V84|1|1|A|3347
8V84|1|1|G|3348
8V84|1|1|C|3349
8V84|1|1|C|3350
*
8V84|1|1|G|3353
8V84|1|1|U|3354
8V84|1|1|U|3355
8V84|1|1|G|3356
8V84|1|1|U|3357
8V84|1|1|U|3358
8V84|1|1|A|3359
8V84|1|1|C|3360
8V84|1|1|G|3361
8V84|1|1|A|3362
8V84|1|1|U|3363
8V84|1|1|C|3364
8V84|1|1|U|3365
Current chains
- Chain 1
- Saccharomyces cerevisiae 25S ribosomal RNA
Nearby chains
- Chain u
- Ribosome biogenesis protein RLP24
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