IL_8V87_054
3D structure
- PDB id
- 8V87 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S ribosome biogenesis intermediate (Dbp10 post-catalytic structure - Overall map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- AUUCUUC*GGAAUAGUU
- Length
- 16 nucleotides
- Bulged bases
- 8V87|1|1|U|1627, 8V87|1|1|C|1628, 8V87|1|1|U|1815, 8V87|1|1|A|1816
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8V87|1|1|A|1625
8V87|1|1|U|1626
8V87|1|1|U|1627
8V87|1|1|C|1628
8V87|1|1|U|1629
8V87|1|1|U|1630
8V87|1|1|C|1631
*
8V87|1|1|G|1811
8V87|1|1|G|1812
8V87|1|1|A|1813
8V87|1|1|A|1814
8V87|1|1|U|1815
8V87|1|1|A|1816
8V87|1|1|G|1817
8V87|1|1|U|1818
8V87|1|1|U|1819
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain Z
- 60S ribosomal protein L27-A
- Chain m
- Ribosome biogenesis protein ERB1
- Chain n
- Pescadillo homolog
- Chain t
- Ribosome biogenesis protein RLP7
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