IL_8V9L_018
3D structure
- PDB id
- 8V9L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGG*UC
- Length
- 5 nucleotides
- Bulged bases
- 8V9L|1|A|G|684
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8V9L_018 not in the Motif Atlas
- Homologous match to IL_7A0S_012
- Geometric discrepancy: 0.5686
- The information below is about IL_7A0S_012
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
8V9L|1|A|G|683
8V9L|1|A|G|684
8V9L|1|A|G|685
*
8V9L|1|A|U|780
8V9L|1|A|C|781
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 7
- 50S ribosomal protein L35
- Chain E
- Large ribosomal subunit protein uL4
- Chain N
- 50S ribosomal protein L15
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