IL_8V9L_074
3D structure
- PDB id
- 8V9L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAUGG*UGAG
- Length
- 9 nucleotides
- Bulged bases
- 8V9L|1|A|U|1932
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8V9L_074 not in the Motif Atlas
- Geometric match to IL_6DLR_005
- Geometric discrepancy: 0.2673
- The information below is about IL_6DLR_005
- Detailed Annotation
- tWW and near cWH
- Broad Annotation
- tWW and near cWH
- Motif group
- IL_04785.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
8V9L|1|A|C|1930
8V9L|1|A|A|1931
8V9L|1|A|U|1932
8V9L|1|A|G|1933
8V9L|1|A|G|1934
*
8V9L|1|A|U|1960
8V9L|1|A|G|1961
8V9L|1|A|A|1962
8V9L|1|A|G|1963
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: