IL_8VIO_173

3D structure

PDB id

8VIO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis HflX bound to a 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.26 Å

Loop

Sequence

GUGUCGUGAGAUGUU*GCAAC

Length

20 nucleotides

Bulged bases

8VIO|1|a|G|1057

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VIO|1|a|G|1052
8VIO|1|a|U|1053
8VIO|1|a|G|1054
8VIO|1|a|U|1055
8VIO|1|a|C|1056
8VIO|1|a|G|1057
8VIO|1|a|U|1058
8VIO|1|a|G|1059
8VIO|1|a|A|1060
8VIO|1|a|G|1061
8VIO|1|a|A|1062
8VIO|1|a|U|1063
8VIO|1|a|G|1064
8VIO|1|a|U|1065
8VIO|1|a|U|1066
*
8VIO|1|a|G|1079
8VIO|1|a|C|1080
8VIO|1|a|A|1081
8VIO|1|a|A|1082
8VIO|1|a|C|1083

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain h

30S Ribosomal Protein S2

Chain k

30S Ribosomal Protein S5