IL_8VK0_046
3D structure
- PDB id
- 8VK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.14 Å
Loop
- Sequence
- UCGCGAAGACAA*UCAAGUG
- Length
- 19 nucleotides
- Bulged bases
- 8VK0|1|A|A|1164, 8VK0|1|A|G|1165, 8VK0|1|A|A|1228
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VK0|1|A|U|1158
8VK0|1|A|C|1159
8VK0|1|A|G|1160
8VK0|1|A|C|1161
8VK0|1|A|G|1162
8VK0|1|A|A|1163
8VK0|1|A|A|1164
8VK0|1|A|G|1165
8VK0|1|A|A|1166
8VK0|1|A|C|1167
8VK0|1|A|A|1168
8VK0|1|A|A|1169
*
8VK0|1|A|U|1226
8VK0|1|A|C|1227
8VK0|1|A|A|1228
8VK0|1|A|A|1229
8VK0|1|A|G|1230
8VK0|1|A|U|1231
8VK0|1|A|G|1232
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L6
- Chain I
- 50S ribosomal protein L10
- Chain W
- 50S ribosomal protein L25
Coloring options: