IL_8VKI_034

3D structure

PDB id

8VKI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

GGGC*GUUAC

Length

9 nucleotides

Bulged bases

8VKI|1|A|A|1011

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VKI|1|A|G|996
8VKI|1|A|G|997
8VKI|1|A|G|998
8VKI|1|A|C|999
*
8VKI|1|A|G|1008
8VKI|1|A|U|1009
8VKI|1|A|U|1010
8VKI|1|A|A|1011
8VKI|1|A|C|1012

Current chains

Chain A

23S ribosomal RNA

Nearby chains