IL_8VKI_082

3D structure

PDB id

8VKI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

CUGUGAAGC*GUGGAG

Length

15 nucleotides

Bulged bases

8VKI|1|A|U|2355

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VKI|1|A|C|2352
8VKI|1|A|U|2353
8VKI|1|A|G|2354
8VKI|1|A|U|2355
8VKI|1|A|G|2356
8VKI|1|A|A|2357
8VKI|1|A|A|2358
8VKI|1|A|G|2359
8VKI|1|A|C|2360
*
8VKI|1|A|G|2377
8VKI|1|A|U|2378
8VKI|1|A|G|2379
8VKI|1|A|G|2380
8VKI|1|A|A|2381
8VKI|1|A|G|2382

Current chains

Chain A

23S ribosomal RNA

Nearby chains