IL_8VKI_090
3D structure
- PDB id
- 8VKI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- AUC*GGUUU
- Length
- 8 nucleotides
- Bulged bases
- 8VKI|1|A|U|2715
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VKI_090 not in the Motif Atlas
- Homologous match to IL_9DFE_094
- Geometric discrepancy: 0.1576
- The information below is about IL_9DFE_094
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36931.1
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 23
Unit IDs
8VKI|1|A|A|2683
8VKI|1|A|U|2684
8VKI|1|A|C|2685
*
8VKI|1|A|G|2713
8VKI|1|A|G|2714
8VKI|1|A|U|2715
8VKI|1|A|U|2716
8VKI|1|A|U|2717
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S Ribosomal Protein L37
- Chain 4
- GTPase HflX
- Chain N
- Large ribosomal subunit protein uL16
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