IL_8VKW_064

3D structure

PDB id

8VKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to delNTE-HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

CGUGAC*GCGUUG

Length

12 nucleotides

Bulged bases

8VKW|1|A|U|1573, 8VKW|1|A|G|1574

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VKW|1|A|C|1571
8VKW|1|A|G|1572
8VKW|1|A|U|1573
8VKW|1|A|G|1574
8VKW|1|A|A|1575
8VKW|1|A|C|1576
*
8VKW|1|A|G|1595
8VKW|1|A|C|1596
8VKW|1|A|G|1597
8VKW|1|A|U|1598
8VKW|1|A|U|1599
8VKW|1|A|G|1600

Current chains

Chain A

23S ribosomal RNA

Nearby chains