IL_8VL1_043
3D structure
- PDB id
- 8VL1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 36 nt long spacer, ops signal, RfaH, NusA, and fMet-tRNAs in E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- GAAG*UGUGCCUUCGGGAAC
- Length
- 19 nucleotides
- Bulged bases
- 8VL1|1|D|U|1030, 8VL1|1|D|C|1031, 8VL1|1|D|G|1032
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VL1|1|D|G|1003
8VL1|1|D|A|1004
8VL1|1|D|A|1005
8VL1|1|D|G|1006
*
8VL1|1|D|U|1023
8VL1|1|D|G|1024
8VL1|1|D|U|1025
8VL1|1|D|G|1026
8VL1|1|D|C|1027
8VL1|1|D|C|1028
8VL1|1|D|U|1029
8VL1|1|D|U|1030
8VL1|1|D|C|1031
8VL1|1|D|G|1032
8VL1|1|D|G|1033
8VL1|1|D|G|1034
8VL1|1|D|A|1035
8VL1|1|D|A|1036
8VL1|1|D|C|1037
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain S
- 30S ribosomal protein S14
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