IL_8VOQ_011

3D structure

PDB id

8VOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

9.3 Å

Loop

Sequence

GGGGGAUAAC*GCUAAUACCGC

Length

21 nucleotides

Bulged bases

8VOQ|1|D|U|173

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VOQ|1|D|G|144
8VOQ|1|D|G|145
8VOQ|1|D|G|146
8VOQ|1|D|G|147
8VOQ|1|D|G|148
8VOQ|1|D|A|149
8VOQ|1|D|U|150
8VOQ|1|D|A|151
8VOQ|1|D|A|152
8VOQ|1|D|C|153
*
8VOQ|1|D|G|168
8VOQ|1|D|C|169
8VOQ|1|D|U|170
8VOQ|1|D|A|171
8VOQ|1|D|A|172
8VOQ|1|D|U|173
8VOQ|1|D|A|174
8VOQ|1|D|C|175
8VOQ|1|D|C|176
8VOQ|1|D|G|177
8VOQ|1|D|C|178

Current chains

Chain D

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S20