IL_8VOQ_031

3D structure

PDB id

8VOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

9.3 Å

Loop

Sequence

AGAAUU*AGGAAU

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VOQ|1|D|A|673
8VOQ|1|D|G|674
8VOQ|1|D|A|675
8VOQ|1|D|A|676
8VOQ|1|D|U|677
8VOQ|1|D|U|678
*
8VOQ|1|D|A|712
8VOQ|1|D|G|713
8VOQ|1|D|G|714
8VOQ|1|D|A|715
8VOQ|1|D|A|716
8VOQ|1|D|U|717

Current chains

Chain D

16S rRNA

Nearby chains

Chain C

30S ribosomal protein S18

Chain F

30S ribosomal protein S21

Chain L

30S ribosomal protein S6

Chain Q

30S ribosomal protein S11

Chain h

50S ribosomal protein L2