IL_8VOS_011

3D structure

PDB id

8VOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 60 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GGGGGAUAAC*GCUAAUACCGC

Length

21 nucleotides

Bulged bases

8VOS|1|D|U|173

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VOS|1|D|G|144
8VOS|1|D|G|145
8VOS|1|D|G|146
8VOS|1|D|G|147
8VOS|1|D|G|148
8VOS|1|D|A|149
8VOS|1|D|U|150
8VOS|1|D|A|151
8VOS|1|D|A|152
8VOS|1|D|C|153
*
8VOS|1|D|G|168
8VOS|1|D|C|169
8VOS|1|D|U|170
8VOS|1|D|A|171
8VOS|1|D|A|172
8VOS|1|D|U|173
8VOS|1|D|A|174
8VOS|1|D|C|175
8VOS|1|D|C|176
8VOS|1|D|G|177
8VOS|1|D|C|178

Current chains

Chain D

16S rRNA

Nearby chains

Chain E

Small ribosomal subunit protein bS20