IL_8VOS_146

3D structure

PDB id

8VOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 60 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GUGUAGGAUAGG*CCC

Length

15 nucleotides

Bulged bases

8VOS|1|a|U|2111, 8VOS|1|a|A|2114, 8VOS|1|a|G|2115, 8VOS|1|a|U|2118, 8VOS|1|a|A|2119

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VOS|1|a|G|2110
8VOS|1|a|U|2111
8VOS|1|a|G|2112
8VOS|1|a|U|2113
8VOS|1|a|A|2114
8VOS|1|a|G|2115
8VOS|1|a|G|2116
8VOS|1|a|A|2117
8VOS|1|a|U|2118
8VOS|1|a|A|2119
8VOS|1|a|G|2120
8VOS|1|a|G|2121
*
8VOS|1|a|C|2177
8VOS|1|a|C|2178
8VOS|1|a|C|2179

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Transfer RNA; tRNA