IL_8VOS_147

3D structure

PDB id

8VOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 60 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GGGAG*CGACCUUGAAAUACC

Length

20 nucleotides

Bulged bases

8VOS|1|a|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VOS|1|a|G|2123
8VOS|1|a|G|2124
8VOS|1|a|G|2125
8VOS|1|a|A|2126
8VOS|1|a|G|2127
*
8VOS|1|a|C|2161
8VOS|1|a|G|2162
8VOS|1|a|A|2163
8VOS|1|a|C|2164
8VOS|1|a|C|2165
8VOS|1|a|U|2166
8VOS|1|a|U|2167
8VOS|1|a|G|2168
8VOS|1|a|A|2169
8VOS|1|a|A|2170
8VOS|1|a|A|2171
8VOS|1|a|U|2172
8VOS|1|a|A|2173
8VOS|1|a|C|2174
8VOS|1|a|C|2175

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Transfer RNA; tRNA