IL_8VPK_009

3D structure

PDB id

8VPK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-B-Ery

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

GUGAGAAAA*UC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VPK|1|A|G|356
8VPK|1|A|U|357
8VPK|1|A|G|358
8VPK|1|A|A|359
8VPK|1|A|G|360
8VPK|1|A|A|361
8VPK|1|A|A|362
8VPK|1|A|A|363
8VPK|1|A|A|364
*
8VPK|1|A|U|438
8VPK|1|A|C|439

Current chains

Chain A

23S ribosomal RNA

Nearby chains