IL_8VR4_043
3D structure
- PDB id
- 8VR4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-A-Ery
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GGAAAAG*CGAUAAUGUAGCGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 8VR4|1|A|U|1245, 8VR4|1|A|U|1248
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VR4|1|A|G|1142
8VR4|1|A|G|1143
8VR4|1|A|A|1144
8VR4|1|A|A|1145
8VR4|1|A|A|1146
8VR4|1|A|A|1147
8VR4|1|A|G|1148
*
8VR4|1|A|C|1242
8VR4|1|A|G|1243
8VR4|1|A|A|1244
8VR4|1|A|U|1245
8VR4|1|A|A|1246
8VR4|1|A|A|1247
8VR4|1|A|U|1248
8VR4|1|A|G|1249
8VR4|1|A|U|1250
8VR4|1|A|A|1251
8VR4|1|A|G|1252
8VR4|1|A|C|1253
8VR4|1|A|G|1254
8VR4|1|A|G|1255
8VR4|1|A|G|1256
8VR4|1|A|G|1257
8VR4|1|A|C|1258
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S Ribosomal Protein L27
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain D
- 50S ribosomal protein L3
- Chain K
- 50S Ribosomal Protein L13
- Chain N
- Large ribosomal subunit protein uL16
- Chain f
- 50S ribosomal protein L36
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