IL_8VR4_084

3D structure

PDB id

8VR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-A-Ery

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UUAAGAGGACC*GAGAAUUUAAG

Length

22 nucleotides

Bulged bases

8VR4|1|A|A|2073

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VR4|1|A|U|2068
8VR4|1|A|U|2069
8VR4|1|A|A|2070
8VR4|1|A|A|2071
8VR4|1|A|G|2072
8VR4|1|A|A|2073
8VR4|1|A|G|2074
8VR4|1|A|G|2075
8VR4|1|A|A|2076
8VR4|1|A|C|2077
8VR4|1|A|C|2078
*
8VR4|1|A|G|2105
8VR4|1|A|A|2106
8VR4|1|A|G|2107
8VR4|1|A|A|2108
8VR4|1|A|A|2109
8VR4|1|A|U|2110
8VR4|1|A|U|2111
8VR4|1|A|U|2112
8VR4|1|A|A|2113
8VR4|1|A|A|2114
8VR4|1|A|G|2115

Current chains

Chain A

23S ribosomal RNA

Nearby chains