IL_8VR4_098

3D structure

PDB id

8VR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-A-Ery

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GACUGUGAAGC*GUGGAGU

Length

18 nucleotides

Bulged bases

8VR4|1|A|U|2355, 8VR4|1|A|G|2359

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VR4|1|A|G|2350
8VR4|1|A|A|2351
8VR4|1|A|C|2352
8VR4|1|A|U|2353
8VR4|1|A|G|2354
8VR4|1|A|U|2355
8VR4|1|A|G|2356
8VR4|1|A|A|2357
8VR4|1|A|A|2358
8VR4|1|A|G|2359
8VR4|1|A|C|2360
*
8VR4|1|A|G|2377
8VR4|1|A|U|2378
8VR4|1|A|G|2379
8VR4|1|A|G|2380
8VR4|1|A|A|2381
8VR4|1|A|G|2382
8VR4|1|A|U|2383

Current chains

Chain A

23S ribosomal RNA

Nearby chains